01 · The host perspective
Every variant, in context.
Walk through a variant result with its format checks, sources and report. The annotations are synthetic and do not constitute biological or clinical interpretation.
Starting point
Predefined public demo. The parser accepts compatible VCF, VCF.GZ, TXT and TSV files; private runs require enablement.
Review experience
Variants, QC, sources and report
Questions this line organizes
- What does this file contain, and what passed the checks?
- Which method produced each result?
- What information is missing for a responsible interpretation?
Methods and availability
File quality
Structure, valid variants and reasons for rejection. Validating the format is not the same as validating the biology.
Annotation and prioritization
The demonstration assigns annotations deterministically and synthetically. Adding real sources and evaluating them is part of the pending scientific work.
Interpretation boundary
No risk scores, ancestry, diagnosis or treatment response are offered.
Interactive preview
A demonstration panel with synthetic data, moved here from the home page. No variant corresponds to a real person.
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Your genomic summary
A fuller view, with provenance on every figure.
A shared review framework
Observation, available quality, source and version, uncertainty, permitted use, research question and report. The public case lets you walk through computed results; collaborative review per study and private runs require dedicated development and enablement.
Research · not for clinical use
Every finding needs context.
The framework connects observation, quality, source, uncertainty, permitted use, research question and report. Collaborative review per study is in development.
Observation
The public case presents computations on cohort data. The genomics and microbiome demos use synthetic fixtures. Each experience states its origin.
Inference
Annotations, associations or predictions that depend on references, models and assumptions. They are not direct measurements.
Interpretation
Conclusions limited to the available context and evidence. These demos offer no diagnosis or prescription.
Methods and background reading
These references explain the approach and its limits. They do not validate the demo's synthetic figures and imply no affiliation.
- International consensus on microbiome testing ↗
Clinical utility, standards and limits of interpretation.
- QIIME 2 · microbial marker gene analysis ↗
Methodological reference for amplicon analysis. The methods actually used are detailed in the case report.
- Classifier validation across cohorts ↗
Performance in one cohort does not guarantee generalization to others.
- Limits of co-occurrence networks ↗
A statistical association does not demonstrate a causal interaction.